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Ligation, Rapid and Rapid PCR Barcoding Libraries

Oxford Nanopore

Ligation, Rapid and Rapid PCR Barcoding Libraries

Preparing a DNA library in 10 minutes: the choice between maximum yield and speed

Oxford Nanopore Ligas, Rapid and Barcoded Library Preparation Kits offer a choice between maximum output, speed and multiplexing.

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Ligas sets keep the length of the input fragments and are oriented towards high yield; Rapid chemistry reduces preparation to about 10 minutes; barcoding combines several samples in one cell. The choice of set depends on the type of sample and the depth required.

In the official line: Ligation Sequencing Kit - about 60 minutes and about 1 μg gDNA; Rapid Sequencing Kit - about 10 minutes and about 200 ng gDNA; Rapid PCR Barcoding - about 15 minutes plus PCR and 1-5 ng gDNA. Compatibility is checked according to the pore and chemistry version.

Selection of the task

  • Ligas sets retain the length of the input DNA fragments and give the maximum yield
  • Rapid chemistry cuts training to about 10 minutes
  • Barcoding combines several samples in one flow cell

Throughput

  • Ligation Sequencing Kit: about 60 minutes, intake about 1 μg of gDNA (or 100–200 fmol for amplicons)
  • Rapid Sequencing Kit: about 10 minutes, input about 200 ng gDNA (or 50 ng for amplicons)
  • Rapid PCR Barcoding Kit: About 15 minutes plus PCR, 1–5 ng gDNA input

Compatibility

  • Requires flow cells for DNA (MinION, PromethION, Flongle Flow Cell)
  • Compatibility is tested by pore version and current chemistry version

Preparation of the library

ParameterLigation Sequencing KitRapid Sequencing KitRapid PCR Barcoding Kit
Time for preparation60 minutesabout 10 minutesabout 15 minutes + PCR
Input material~1 μg of gDNA (100–200 fmol for amplicons)~200 ng gDNA (50 ng for amplicons)1-5 ng gDNA
Length of readinglengthrandom distribution depending on the length of the fragment~2 kb
PCR is requirednonoyes
Key advantagemaximum yieldquickest preparationminimum entry requirements

Compatibility

ParameterLigation Sequencing KitRapid Sequencing KitRapid PCR Barcoding Kit
Type of flow cellDNA cells (MinION, PromethION, Flongle)